User contributions
(newest | oldest) View (newer 500 | older 500) (20 | 50 | 100 | 250 | 500)
- 09:34, 22 June 2021 (diff | hist) . . (+60) . . Literature Studies
- 08:08, 22 June 2021 (diff | hist) . . (+289) . . Literature Studies
- 16:49, 1 May 2021 (diff | hist) . . (+81) . . Literature Studies (→Results from Literature)
- 14:48, 2 February 2021 (diff | hist) . . (+1,488) . . N Benchmarking Quantitative Performance in Label-Free Proteomics (Created page with "__NUMBEREDHEADINGS__ === Citation === Dowell JA, Wright LJ, Armstrong EA, Denu JM (2021). Benchmarking Quantitative Performance in Label-Free Proteomics. ACS Omega. [https://d...") (current)
- 14:44, 2 February 2021 (diff | hist) . . (+93) . . Literature Studies (→Omics Workflows)
- 14:41, 2 February 2021 (diff | hist) . . (0) . . Literature Studies (→Results from Literature)
- 14:40, 2 February 2021 (diff | hist) . . (-2) . . Literature Studies (→Results from Literature)
- 14:39, 2 February 2021 (diff | hist) . . (+2) . . Literature Studies (→Results from Literature)
- 14:38, 2 February 2021 (diff | hist) . . (+2) . . Literature Studies (→Results from Literature)
- 14:36, 2 February 2021 (diff | hist) . . (+1) . . Literature Studies (→Results from Literature)
- 14:34, 2 February 2021 (diff | hist) . . (-1) . . NormalyzerDE: Online Tool for Improved Normalization of Omics Expression Data and High-Sensitivity Differential Expression Analysis (→Citation) (current)
- 14:33, 2 February 2021 (diff | hist) . . (-2) . . The effects of nonignorable missing data on label-free mass spectrometry proteomics experiments (→Citation) (current)
- 14:32, 2 February 2021 (diff | hist) . . (-2) . . A comparative study of evaluating missing value imputation methods in label-free proteomics (→Citation) (current)
- 14:31, 2 February 2021 (diff | hist) . . (-16) . . A comparative study of evaluating missing value imputation methods in label-free proteomics
- 14:25, 2 February 2021 (diff | hist) . . (+531) . . N A comparative study of evaluating missing value imputation methods in label-free proteomics (Created page with "=== Citation === O'Brien JJ, Gunawardena HP, Paulo JA, Chen X, Ibrahim JG, Gygi SP, Qaqish BF (2018). The effects of nonignorable missing data on label-free mass spectrometry...")
- 14:23, 2 February 2021 (diff | hist) . . (+118) . . Literature Studies (→Imputation methods for missing values)
- 17:23, 8 November 2020 (diff | hist) . . (+1,645) . . N Simultaneous Improvement in the Precision, Accuracy and Robustness of Label-free Proteome Quantification by Optimizing Data Manipulation Chains (Created page with "__NUMBEREDHEADINGS__ === Citation === Tang J, Fu J, Wang Y, Luo Y, Yang Q, Li B, Tu G, Hong J, Cui X, Chen Y, Yao L. Simultaneous improvement in the precision, accuracy, and r...") (current)
- 17:21, 8 November 2020 (diff | hist) . . (+170) . . Literature Studies (→Omics Workflows)
- 12:56, 9 March 2020 (diff | hist) . . (+104) . . Literature Studies (→Identifying differential features)
- 12:20, 9 March 2020 (diff | hist) . . (+180) . . Literature Studies (→Identifying differential features)
- 13:42, 4 March 2020 (diff | hist) . . (+1,518) . . N The impact of sample imbalance on identifying differentially expressed genes (Created page with "__NUMBEREDHEADINGS__ === Citation === Kun Yang, Jianzhong Li and Hong Gao, The impact of sample imbalance on identifying differentially expressed genes, 2006, BMC Bioinformati...") (current)
- 13:31, 4 March 2020 (diff | hist) . . (+102) . . Literature Studies (→Identifying differential features)
- 16:49, 28 February 2020 (diff | hist) . . (-1) . . Predicting Breast Cancer Survivability Using Data Mining Techniques (→Citation) (current)
- 16:49, 28 February 2020 (diff | hist) . . (+1,786) . . N Predicting Breast Cancer Survivability Using Data Mining Techniques (Created page with "__NUMBEREDHEADINGS__ === Citation === Sarvestani, A. S., Safavi, A. A., Parandeh, N. M., & Salehi, M., Predicting breast cancer survivability using data mining techniques, 20...")
- 16:46, 28 February 2020 (diff | hist) . . (+33) . . Literature Studies
- 16:45, 28 February 2020 (diff | hist) . . (-108) . . Literature Studies (Remove Harper, it is not based on high-througput data)
- 16:41, 28 February 2020 (diff | hist) . . (-2) . . Comparison of statistical methods for classification of ovarian cancer using mass spectrometry data (→Outcome O1) (current)
- 16:41, 28 February 2020 (diff | hist) . . (+2,149) . . N Comparison of statistical methods for classification of ovarian cancer using mass spectrometry data (Created page with "__NUMBEREDHEADINGS__ === Citation === Baolin Wu, Tom Abbott, David Fishman, Walter McMurray, Gil Mor, Kathryn Stone, David Ward, Kenneth Williams, Hongyu Zhao, Comparison of s...")
- 16:18, 28 February 2020 (diff | hist) . . (+30) . . Literature Studies (→Omics Workflows)
- 16:16, 28 February 2020 (diff | hist) . . (+102) . . Literature Studies (→Preprocessing high-throughput data)
- 16:11, 28 February 2020 (diff | hist) . . (+76) . . Literature Studies (→Classification)
- 16:10, 28 February 2020 (diff | hist) . . (+118) . . Literature Studies (→Identifying differential features)
- 16:07, 28 February 2020 (diff | hist) . . (-16) . . Literature Studies (→Identifying sets of features (e.g. gene set analyses))
- 16:06, 28 February 2020 (diff | hist) . . (+149) . . Literature Studies (→Identifying sets of features (e.g. gene set analyses))
- 16:05, 28 February 2020 (diff | hist) . . (+4) . . Literature Studies (→Dimension reduction)
- 16:04, 28 February 2020 (diff | hist) . . (-55) . . Literature Studies (→Identifying differential regions (e.g. DMRs))
- 16:02, 28 February 2020 (diff | hist) . . (+224) . . Literature Studies (→Identifying differential regions (e.g. DMRs))
- 15:59, 28 February 2020 (diff | hist) . . (0) . . Literature Studies (→Dimension reduction)
- 15:58, 28 February 2020 (diff | hist) . . (+1) . . Literature Studies (→Dimension reduction)
- 15:58, 28 February 2020 (diff | hist) . . (+32) . . Literature Studies (→Dimension reduction)
- 15:56, 28 February 2020 (diff | hist) . . (+54) . . Literature Studies (→Dimension reduction)
- 15:57, 25 February 2020 (diff | hist) . . (+596) . . Toward a gold standard for benchmarking gene set enrichment analysis (current)
- 15:41, 25 February 2020 (diff | hist) . . (-1) . . Toward a gold standard for benchmarking gene set enrichment analysis (→Citation)
- 15:40, 25 February 2020 (diff | hist) . . (+159) . . A general modular framework for gene set enrichment analysis (current)
- 15:38, 25 February 2020 (diff | hist) . . (+1,854) . . N Toward a gold standard for benchmarking gene set enrichment analysis (Created page with "__ NUMBEREDHEADINGS__ === Citation === Geistlinger, L., Csaba, G., Santarelli, M., Ramos, M., Schiffer, L., Law, C., ... & Zimmer, R., Toward a gold standard for benchmarking...")
- 15:31, 25 February 2020 (diff | hist) . . (+84) . . Literature Studies (→Identifying sets of features (e.g. gene set analyses))
- 15:26, 25 February 2020 (diff | hist) . . (-1) . . A general modular framework for gene set enrichment analysis (→Design for Outcome O4: Significance assessment)
- 15:26, 25 February 2020 (diff | hist) . . (-1) . . A general modular framework for gene set enrichment analysis (→Further comments and aspects)
- 15:26, 25 February 2020 (diff | hist) . . (-56) . . A general modular framework for gene set enrichment analysis (→References)
- 15:26, 25 February 2020 (diff | hist) . . (+45) . . A general modular framework for gene set enrichment analysis (→Outcome O5: Global approaches)
- 15:24, 25 February 2020 (diff | hist) . . (-70) . . A general modular framework for gene set enrichment analysis (→Study outcomes)
- 15:24, 25 February 2020 (diff | hist) . . (+21) . . A general modular framework for gene set enrichment analysis
- 15:23, 25 February 2020 (diff | hist) . . (+2,070) . . A general modular framework for gene set enrichment analysis
- 14:46, 25 February 2020 (diff | hist) . . (+82) . . A general modular framework for gene set enrichment analysis (→Outcome O2: Transformation of the gene level statistics)
- 14:45, 25 February 2020 (diff | hist) . . (+26) . . A general modular framework for gene set enrichment analysis (→Outcome O2: Transformation of the gene level statistics)
- 14:43, 25 February 2020 (diff | hist) . . (+1,718) . . A general modular framework for gene set enrichment analysis
- 14:10, 25 February 2020 (diff | hist) . . (+431) . . A general modular framework for gene set enrichment analysis
- 14:03, 25 February 2020 (diff | hist) . . (-1) . . A general modular framework for gene set enrichment analysis (→Citation)
- 14:03, 25 February 2020 (diff | hist) . . (+75) . . A general modular framework for gene set enrichment analysis (→Summary)
- 14:00, 25 February 2020 (diff | hist) . . (+1,768) . . N A general modular framework for gene set enrichment analysis (Created page with "__NUMBEREDHEADINGS__ === Citation === M Ackermann and K Strimmer, A general modular framework for gene set enrichment analysis, 2009, BMC Bioinformatics, 10:47, pages etc in a...")
- 13:54, 25 February 2020 (diff | hist) . . (+269) . . Gene set analysis methods: a systematic comparison (current)
- 13:50, 25 February 2020 (diff | hist) . . (+560) . . Gene set analysis methods: a systematic comparison
- 13:35, 25 February 2020 (diff | hist) . . (+631) . . Gene set analysis methods: a systematic comparison
- 13:20, 25 February 2020 (diff | hist) . . (+650) . . Gene set analysis methods: a systematic comparison
- 13:08, 25 February 2020 (diff | hist) . . (-81) . . Gene set analysis methods: a systematic comparison
- 13:03, 25 February 2020 (diff | hist) . . (-77) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→References) (current)
- 13:02, 25 February 2020 (diff | hist) . . (+19) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Design for Outcome O2)
- 13:01, 25 February 2020 (diff | hist) . . (+33) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Design for Outcome O1)
- 13:00, 25 February 2020 (diff | hist) . . (-138) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→General aspects)
- 12:59, 25 February 2020 (diff | hist) . . (-2) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Outcome O2)
- 12:58, 25 February 2020 (diff | hist) . . (0) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16
- 12:56, 25 February 2020 (diff | hist) . . (-70) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Study outcomes)
- 12:55, 25 February 2020 (diff | hist) . . (-98) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16)
- 12:55, 25 February 2020 (diff | hist) . . (-1) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16)
- 12:54, 25 February 2020 (diff | hist) . . (-1) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Further outcomes)
- 12:54, 25 February 2020 (diff | hist) . . (+878) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16)
- 12:40, 25 February 2020 (diff | hist) . . (+434) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Design for Outcome O2)
- 12:23, 25 February 2020 (diff | hist) . . (+29) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16)
- 12:22, 25 February 2020 (diff | hist) . . (+1,779) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16)
- 11:45, 25 February 2020 (diff | hist) . . (+1,665) . . N Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (Created page with "__NUMBEREDHEADINGS__ == Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 == Tintle, N. L., Borchers, B., Brown, M.,...")
- 11:36, 25 February 2020 (diff | hist) . . (+115) . . Literature Studies (→Identifying sets of features (e.g. gene set analyses))
- 10:44, 25 February 2020 (diff | hist) . . (+1,441) . . Gene set analysis methods: a systematic comparison (→Gene set analysis methods: a systematic comparison)
- 10:13, 25 February 2020 (diff | hist) . . (+434) . . Gene set analysis methods: a systematic comparison (→Outcome O1)
- 10:00, 25 February 2020 (diff | hist) . . (+1,130) . . Gene set analysis methods: a systematic comparison (→Study design and evidence level)
- 09:32, 25 February 2020 (diff | hist) . . (+1) . . Literature Studies (→Identifying sets of features (e.g. gene set analyses))
- 09:32, 25 February 2020 (diff | hist) . . (+74) . . Literature Studies (→Identifying sets of features (e.g. gene set analyses))
- 09:14, 25 February 2020 (diff | hist) . . (+1,690) . . N Gene set analysis methods: a systematic comparison (First version)
- 08:59, 25 February 2020 (diff | hist) . . (+64) . . Literature Studies (→Identifying sets of features (e.g. gene set analyses))
- 16:50, 17 January 2020 (diff | hist) . . (+3) . . Literature Studies (→ODE-based Modelling)
- 16:49, 17 January 2020 (diff | hist) . . (+198) . . Literature Studies (→ODE-based Modelling)
- 14:00, 27 June 2019 (diff | hist) . . (-4) . . Literature Studies (→Identifying differential regions (e.g. DMRs))
- 14:00, 27 June 2019 (diff | hist) . . (+4) . . Literature Studies (→Identifying differential regions (e.g. DMRs))
- 13:59, 27 June 2019 (diff | hist) . . (-15) . . Literature Studies (→Identifying differential regions (e.g. DMRs))
- 13:56, 27 June 2019 (diff | hist) . . (+1) . . Literature Studies
- 13:54, 27 June 2019 (diff | hist) . . (+227) . . Literature Studies
- 12:46, 26 June 2019 (diff | hist) . . (+268) . . N Parameter estimation with bio-inspired meta-heuristic optimization: modeling the dynamics of endocytosis (Page created, reference added)
- 12:45, 26 June 2019 (diff | hist) . . (+127) . . Literature Studies (→ODE-based Modelling)
- 12:31, 26 June 2019 (diff | hist) . . (-1) . . Hybrid optimization method with general switching strategy for parameter estimation
- 12:31, 26 June 2019 (diff | hist) . . (+1,559) . . N Hybrid optimization method with general switching strategy for parameter estimation (Page created, reference added)
- 08:20, 18 June 2019 (diff | hist) . . (-1) . . Benchmarking optimization methods for parameter estimation in large kinetic models (→Outcome O5) (current)
- 08:19, 18 June 2019 (diff | hist) . . (-7) . . Benchmarking optimization methods for parameter estimation in large kinetic models
- 08:19, 18 June 2019 (diff | hist) . . (-2) . . Benchmarking optimization methods for parameter estimation in large kinetic models (→Outcome O1)
- 08:19, 18 June 2019 (diff | hist) . . (-1) . . Benchmarking optimization methods for parameter estimation in large kinetic models (→General aspects)
- 08:18, 18 June 2019 (diff | hist) . . (0) . . Benchmarking optimization methods for parameter estimation in large kinetic models (→Further comments and aspects)
- 08:18, 18 June 2019 (diff | hist) . . (-1) . . Benchmarking optimization methods for parameter estimation in large kinetic models (→Further comments and aspects)
- 08:00, 18 June 2019 (diff | hist) . . (+188) . . Benchmarking optimization methods for parameter estimation in large kinetic models
- 07:55, 18 June 2019 (diff | hist) . . (+414) . . Benchmarking optimization methods for parameter estimation in large kinetic models
- 07:50, 18 June 2019 (diff | hist) . . (0) . . Benchmarking optimization methods for parameter estimation in large kinetic models (→Summary)
- 07:50, 18 June 2019 (diff | hist) . . (+86) . . Benchmarking optimization methods for parameter estimation in large kinetic models (→Summary)
- 07:49, 18 June 2019 (diff | hist) . . (-21) . . Benchmarking optimization methods for parameter estimation in large kinetic models (→Paper name)
- 07:47, 18 June 2019 (diff | hist) . . (+89) . . Benchmarking optimization methods for parameter estimation in large kinetic models
- 07:43, 18 June 2019 (diff | hist) . . (+1,176) . . Benchmarking optimization methods for parameter estimation in large kinetic models (Link DOI)
- 07:20, 18 June 2019 (diff | hist) . . (-1) . . Benchmarking optimization methods for parameter estimation in large kinetic models (Link DOI)
- 07:19, 18 June 2019 (diff | hist) . . (+1,330) . . Benchmarking optimization methods for parameter estimation in large kinetic models (Models added)
- 07:02, 18 June 2019 (diff | hist) . . (+2,055) . . N Benchmarking optimization methods for parameter estimation in large kinetic models (Page created with some text)
- 07:29, 12 June 2019 (diff | hist) . . (+8) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus
- 08:31, 4 June 2019 (diff | hist) . . (+16) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→General aspects)
- 08:30, 4 June 2019 (diff | hist) . . (+77) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→General aspects)
- 11:42, 22 May 2019 (diff | hist) . . (-60) . . Literature Studies (Removed section which occurred twice)
- 11:41, 22 May 2019 (diff | hist) . . (+560) . . Literature Studies (Thee papers found at bioRxiv)
- 13:59, 20 February 2019 (diff | hist) . . (+28) . . Literature Studies (→Feature Selection)
- 15:01, 14 February 2019 (diff | hist) . . (-64) . . Literature Studies (→Identifying differential regions (e.g. DMRs))
- 15:37, 29 January 2019 (diff | hist) . . (+612) . . Literature Studies (→Identifying differential regions (e.g. DMRs))
- 12:42, 29 January 2019 (diff | hist) . . (+107) . . Literature Studies (→Identifying different features)
- 17:23, 25 January 2019 (diff | hist) . . (+6) . . m Literature Studies (→Classification)
- 17:22, 25 January 2019 (diff | hist) . . (+1) . . m Literature Studies (→Identifying different features)
- 17:21, 25 January 2019 (diff | hist) . . (+57) . . m Literature Studies (→Identifying different features)
- 17:21, 25 January 2019 (diff | hist) . . (+13) . . m Literature Studies (→Identifying differential regions (e.g. DMRs))
- 17:20, 25 January 2019 (diff | hist) . . (+1,944) . . N DMRfinder: efficiently identifying differentially methylated regions from MethylC-seq data (1st version)
- 17:19, 25 January 2019 (diff | hist) . . (+97) . . Literature Studies (DMRfinder added)
- 15:45, 25 January 2019 (diff | hist) . . (+93) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→General aspects)
- 15:44, 25 January 2019 (diff | hist) . . (+94) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→Design for Outcome O1 and O2)
- 15:19, 25 January 2019 (diff | hist) . . (+104) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→Outcome O1)
- 15:14, 25 January 2019 (diff | hist) . . (+111) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→Design for Outcome O1 and O2)
- 15:12, 25 January 2019 (diff | hist) . . (-8) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→General aspects)
- 15:11, 25 January 2019 (diff | hist) . . (+72) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→Study outcomes)
- 15:09, 25 January 2019 (diff | hist) . . (+122) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus)
- 14:20, 25 January 2019 (diff | hist) . . (+771) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (Added text)
- 14:02, 25 January 2019 (diff | hist) . . (-2) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→General aspects)
- 14:02, 25 January 2019 (diff | hist) . . (+553) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (→General aspects)
- 14:01, 25 January 2019 (diff | hist) . . (+696) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→General aspects)
- 13:56, 25 January 2019 (diff | hist) . . (+2,224) . . N Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (Created page with "__NUMBEREDHEADINGS__ == Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus == David E....")
- 13:46, 25 January 2019 (diff | hist) . . (-1) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→MethCP: Differentially Methylated Region Detection with Change Point Models)
- 13:32, 25 January 2019 (diff | hist) . . (+30) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→Outcome O4)
- 13:27, 25 January 2019 (diff | hist) . . (+237) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→Outcome O2)
- 13:20, 25 January 2019 (diff | hist) . . (+116) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→Outcome O1)
- 13:18, 25 January 2019 (diff | hist) . . (+11) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→Summary)
- 13:17, 25 January 2019 (diff | hist) . . (+1,386) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→MethCP: Differentially Methylated Region Detection with Change Point Models)
- 12:59, 25 January 2019 (diff | hist) . . (+1,668) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→Study outcomes)
- 12:30, 25 January 2019 (diff | hist) . . (+730) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (Added text)
- 12:10, 25 January 2019 (diff | hist) . . (-180) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (Without box)
- 12:09, 25 January 2019 (diff | hist) . . (+1,978) . . N MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (Page created)
- 10:38, 24 January 2019 (diff | hist) . . (+201) . . Guidelines for Summarizing a Literature Study (Reference sentence to the Figure in the original publication)
- 10:36, 24 January 2019 (diff | hist) . . (+339) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→General aspects)
- 10:32, 24 January 2019 (diff | hist) . . (+13) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Design for Outcome O4)
- 10:30, 24 January 2019 (diff | hist) . . (0) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Design for Outcome O4)
- 12:08, 23 January 2019 (diff | hist) . . (+23) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Summary)
- 12:07, 23 January 2019 (diff | hist) . . (+230) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→General aspects)
- 12:03, 23 January 2019 (diff | hist) . . (-151) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Further outcomes)
- 12:02, 23 January 2019 (diff | hist) . . (+81) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Outcome O5)
- 12:01, 23 January 2019 (diff | hist) . . (+82) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Outcome O4)
- 11:59, 23 January 2019 (diff | hist) . . (+203) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Outcome O3)
- 11:58, 23 January 2019 (diff | hist) . . (+88) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Outcome O2)
- 11:57, 23 January 2019 (diff | hist) . . (+60) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Outcome O1)
- 11:56, 23 January 2019 (diff | hist) . . (+1) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Summary)
- 11:54, 23 January 2019 (diff | hist) . . (+3) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Summary)
- 11:53, 23 January 2019 (diff | hist) . . (+245) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (First readable version)
- 11:49, 23 January 2019 (diff | hist) . . (+155) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→Outcome O5)
- 11:44, 23 January 2019 (diff | hist) . . (+1,210) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts
- 09:32, 23 January 2019 (diff | hist) . . (+281) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts
- 09:24, 23 January 2019 (diff | hist) . . (+698) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts)
- 09:06, 23 January 2019 (diff | hist) . . (+4,369) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts
- 16:02, 22 January 2019 (diff | hist) . . (+468) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts)
- 15:50, 22 January 2019 (diff | hist) . . (+2,203) . . N DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (Created page with "__NUMBEREDHEADINGS__ == DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts == Cato...")
- 15:17, 22 January 2019 (diff | hist) . . (+241) . . Literature Studies (Two additional papers)
- 07:48, 14 August 2018 (diff | hist) . . (+287) . . Literature Studies
- 10:13, 10 August 2018 (diff | hist) . . (+284) . . Literature Studies (→Preprocessing high-throughput data)
- 10:03, 10 August 2018 (diff | hist) . . (+157) . . m Literature Studies (→Identifying differences)
- 09:59, 10 August 2018 (diff | hist) . . (+123) . . m Literature Studies (→Preprocessing high-throughput data)
- 09:53, 10 August 2018 (diff | hist) . . (+36) . . m Guidelines for Summarizing a Literature Study
- 09:52, 10 August 2018 (diff | hist) . . (-65) . . m Literature Studies
- 09:51, 10 August 2018 (diff | hist) . . (+59) . . Literature Studies
- 09:50, 10 August 2018 (diff | hist) . . (+108) . . Literature Studies (→Identifying differences)
- 09:33, 10 August 2018 (diff | hist) . . (+78) . . Literature Studies
- 09:27, 10 August 2018 (diff | hist) . . (+521) . . Literature Studies (→Preprocessing high-throughput data)
- 08:52, 10 August 2018 (diff | hist) . . (+146) . . m Project 20 Benchmark Problems for Modelling Intracellular Processes (current)
- 05:46, 10 August 2018 (diff | hist) . . (+21) . . m Benchmarking Projects (current)
- 05:45, 10 August 2018 (diff | hist) . . (+55) . . m Benchmarking Projects (→Projects)
- 05:42, 10 August 2018 (diff | hist) . . (+223) . . Help (→Help and Guidelines for the Benchmark-Wiki)
- 05:41, 10 August 2018 (diff | hist) . . (-223) . . m Getting started with MediaWiki (current)
- 05:40, 10 August 2018 (diff | hist) . . (+1) . . m Benchmarking Studies in Computational Biology
- 14:51, 9 August 2018 (diff | hist) . . (+13) . . MediaWiki:Sidebar (current)
- 14:50, 9 August 2018 (diff | hist) . . (+74) . . Guidelines for Summarizing a Literature Study (→Template code)
- 14:44, 9 August 2018 (diff | hist) . . (+21) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology
- 14:43, 9 August 2018 (diff | hist) . . (0) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Lessons Learned from Quantitative Dynamical Modeling in Systems Biology)
- 14:41, 9 August 2018 (diff | hist) . . (-24) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Lessons Learned from Quantitative Dynamical Modeling in Systems Biology)
- 14:41, 9 August 2018 (diff | hist) . . (+24) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Lessons Learned from Quantitative Dynamical Modeling in Systems Biology)
- 14:40, 9 August 2018 (diff | hist) . . (-73) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Lessons Learned from Quantitative Dynamical Modeling in Systems Biology)
- 14:39, 9 August 2018 (diff | hist) . . (-57) . . Project 20 Benchmark Problems for Modelling Intracellular Processes (→20 Benchmark Problem for Modelling Intracellular Processes)
- 14:36, 9 August 2018 (diff | hist) . . (+40) . . Benchmarking Projects
- 14:35, 9 August 2018 (diff | hist) . . (-2) . . Benchmarking Projects
- 14:34, 9 August 2018 (diff | hist) . . (-269) . . Benchmarking Projects (→Projects)
- 14:30, 9 August 2018 (diff | hist) . . (0) . . m Project Imputation in Proteomics (Ckreutz moved page Imputation in Proteomics: to Project Imputation in Proteomics: Better name) (current)
- 14:30, 9 August 2018 (diff | hist) . . (+46) . . N Imputation in Proteomics: (Ckreutz moved page Imputation in Proteomics: to Project Imputation in Proteomics: Better name) (current) (Tag: New redirect)
- 14:30, 9 August 2018 (diff | hist) . . (0) . . m Project 20 Benchmark Problems for Modelling Intracellular Processes (Ckreutz moved page 20 Benchmark Problem for Modelling Intracellular Processes to Project 20 Benchmark Problems for Modelling Intracellular Processes: Better name)
- 14:30, 9 August 2018 (diff | hist) . . (+81) . . N 20 Benchmark Problem for Modelling Intracellular Processes (Ckreutz moved page 20 Benchmark Problem for Modelling Intracellular Processes to Project 20 Benchmark Problems for Modelling Intracellular Processes: Better name) (current) (Tag: New redirect)
- 14:29, 9 August 2018 (diff | hist) . . (0) . . m Project 20 Benchmark Problems for Modelling Intracellular Processes (Ckreutz moved page Project 20 Benchmark Models to 20 Benchmark Problem for Modelling Intracellular Processes: Better name)
- 14:29, 9 August 2018 (diff | hist) . . (+72) . . N Project 20 Benchmark Models (Ckreutz moved page Project 20 Benchmark Models to 20 Benchmark Problem for Modelling Intracellular Processes: Better name) (current) (Tag: New redirect)
- 14:28, 9 August 2018 (diff | hist) . . (-48) . . Benchmarking Projects (→Projects)
- 14:27, 9 August 2018 (diff | hist) . . (0) . . m Project 20 Benchmark Problems for Modelling Intracellular Processes (Ckreutz moved page 20 Benchmark Models: to Project 20 Benchmark Models)
- 14:27, 9 August 2018 (diff | hist) . . (+41) . . N 20 Benchmark Models: (Ckreutz moved page 20 Benchmark Models: to Project 20 Benchmark Models) (current) (Tag: New redirect)
- 14:26, 9 August 2018 (diff | hist) . . (+11) . . Benchmarking Projects
- 14:26, 9 August 2018 (diff | hist) . . (+50) . . Benchmarking Projects
- 14:25, 9 August 2018 (diff | hist) . . (+56) . . Literature Studies
- 14:23, 9 August 2018 (diff | hist) . . (+71) . . Benchmarking Studies in Computational Biology
- 14:14, 9 August 2018 (diff | hist) . . (+71) . . MediaWiki:Common.css (current)
- 14:13, 9 August 2018 (diff | hist) . . (+387) . . MediaWiki:Common.css
- 14:10, 9 August 2018 (diff | hist) . . (+99) . . MediaWiki:Common.css
- 14:05, 9 August 2018 (diff | hist) . . (+87) . . N MediaWiki:Common.css (Created page with "→CSS placed here will be applied to all skins: #ca-talk { display:none!important; }")
- 13:39, 9 August 2018 (diff | hist) . . (0) . . MediaWiki:Sidebar
- 13:38, 9 August 2018 (diff | hist) . . (+30) . . MediaWiki:Sidebar
- 13:27, 9 August 2018 (diff | hist) . . (+3) . . Literature Studies (→Classification)
- 13:27, 9 August 2018 (diff | hist) . . (+11) . . Literature Studies (Years in bold face instead of headings)
- 13:22, 9 August 2018 (diff | hist) . . (+22) . . Literature Studies
- 12:06, 9 August 2018 (diff | hist) . . (0) . . Literature Studies (→2014)
- 12:05, 9 August 2018 (diff | hist) . . (+1,421) . . Literature Studies (Papers added)
- 11:51, 9 August 2018 (diff | hist) . . (+1,097) . . Literature Studies
- 11:32, 9 August 2018 (diff | hist) . . (+116) . . N Funding (Created page with "The Benchmark-Wiki has been funded by * German Ministry of Education and Research by the grant EA:Sys (FKZ 031L0080)") (current)
- 11:30, 9 August 2018 (diff | hist) . . (+60) . . Benchmarking Studies in Computational Biology
- 11:29, 9 August 2018 (diff | hist) . . (+34) . . Literature Studies (→Literature Results)
- 11:28, 9 August 2018 (diff | hist) . . (+7) . . MediaWiki:Sidebar
- 11:24, 9 August 2018 (diff | hist) . . (-13) . . MediaWiki:Sidebar
- 11:23, 9 August 2018 (diff | hist) . . (0) . . Literature Studies
- 11:23, 9 August 2018 (diff | hist) . . (+247) . . N MediaWiki:Sidebar (Adding projects and literature)
- 11:20, 9 August 2018 (diff | hist) . . (-8) . . Benchmarking Studies in Computational Biology
- 11:19, 9 August 2018 (diff | hist) . . (+8) . . Benchmarking Studies in Computational Biology
- 11:08, 9 August 2018 (diff | hist) . . (-2) . . Main Page (Redirected page to Benchmarking Studies in Computational Biology) (current) (Tag: New redirect)
- 11:08, 9 August 2018 (diff | hist) . . (+61) . . Main Page
- 11:07, 9 August 2018 (diff | hist) . . (-65) . . Main Page (Blanked the page) (Tag: Blanking)
- 11:02, 9 August 2018 (diff | hist) . . (0) . . m Benchmarking Studies in Computational Biology (Ckreutz moved page Home: Benchmarking Studies in Computational Biology to Benchmarking Studies in Computational Biology without leaving a redirect)
- 11:00, 9 August 2018 (diff | hist) . . (+705) . . Benchmarking Studies in Computational Biology (Removed redirect to Benchmarking Studies in Computational Biology) (Tag: Removed redirect)
- 10:51, 9 August 2018 (diff | hist) . . (+254) . . N Help (Created page with "== Help and Guidelines for the Benchmark-Wiki == Guidelines for summarizing a literature study == Help and Syntax for workin...")
- 10:49, 9 August 2018 (diff | hist) . . (-1) . . Benchmarking Projects
- 10:48, 9 August 2018 (diff | hist) . . (+1,177) . . N Benchmarking Projects (Created page with "== Projects == Here own and maybe unpublished projects and results are listed. For adding your own outcome add a link and create a new page. [https://www.benchmarking.un...")
- 10:47, 9 August 2018 (diff | hist) . . (+410) . . N Literature Studies (Created page with "== Literature Results == Here outcomes of benchmarking studies from the literature are collected. Please extend this list by creating a new page and adding a link below. Us...")
- 10:17, 9 August 2018 (diff | hist) . . (+59) . . N Benchmarking Studies in Computational Biology (Ckreutz moved page Home: Benchmarking Studies in Computational Biology to Benchmarking Studies in Computational Biology: Renaming title) (Tag: New redirect)
- 10:12, 9 August 2018 (diff | hist) . . (+65) . . N Main Page (Ckreutz moved page Main Page to Home: Benchmarking Studies in Computational Biology: New page title) (Tag: New redirect)
- 10:09, 9 August 2018 (diff | hist) . . (0) . . Guidelines for Summarizing a Literature Study (→Template code for creating a new page for "Literature Results")
- 10:08, 9 August 2018 (diff | hist) . . (-3) . . Guidelines for Summarizing a Literature Study
- 10:04, 9 August 2018 (diff | hist) . . (+1,358) . . Guidelines for Summarizing a Literature Study
- 09:46, 9 August 2018 (diff | hist) . . (+20) . . Getting started with MediaWiki
- 09:46, 9 August 2018 (diff | hist) . . (+66) . . Getting started with MediaWiki (→How to contribute to the Bechmark Wiki?)
- 09:45, 9 August 2018 (diff | hist) . . (+108) . . N File:CreatingAccount.png (current)
- 09:42, 9 August 2018 (diff | hist) . . (+79) . . Getting started with MediaWiki (→Examples for using MediaWiki)
- 09:36, 9 August 2018 (diff | hist) . . (-1) . . m Getting started with MediaWiki (→How to contribute to the Behchmark Wiki?)
- 09:35, 9 August 2018 (diff | hist) . . (+1,070) . . N Getting started with MediaWiki (Created page with "=== How to contribute to the Behchmark Wiki? === For adding content, you have to register. The button is found at the upper left corner. === Getting started with MediaWiki ==...")
- 09:26, 9 August 2018 (diff | hist) . . (+383) . . N Guidelines for Summarizing a Literature Study (Created page with "For adding a new page summarizing the results of a published paper, please try to following these guidelines: * describe outcomes of a paper using a standardized format by us...")
- 09:07, 9 August 2018 (diff | hist) . . (-66) . . m Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Study design and evidence level)
- 09:05, 9 August 2018 (diff | hist) . . (+157) . . m Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Study outcomes)
- 15:06, 7 August 2018 (diff | hist) . . (+579) . . N Concepts for Bechmarking Studies: (Created page with "== Improving Concepts for Bechmarking Studies == === Summary === The goal of this project is * establishing a comprehensive methodology for benchmarking studies * deriving g...") (current)
- 14:56, 7 August 2018 (diff | hist) . . (-2) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Further References)
- 14:49, 7 August 2018 (diff | hist) . . (-2) . . m Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Lessons Learned from Quantitative Dynamical Modeling in Systems Biology)
- 14:48, 7 August 2018 (diff | hist) . . (-6) . . m Lessons Learned from Quantitative Dynamical Modeling in Systems Biology
- 14:47, 7 August 2018 (diff | hist) . . (-1) . . m Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Evidence of the outcomes)
- 14:47, 7 August 2018 (diff | hist) . . (-1) . . m Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Outcome O1 =)
- 14:47, 7 August 2018 (diff | hist) . . (+51) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology
- 14:45, 7 August 2018 (diff | hist) . . (+35) . . m Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Study outcomes)
- 14:43, 7 August 2018 (diff | hist) . . (-32) . . m Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Outcome O1)
- 14:43, 7 August 2018 (diff | hist) . . (+1,475) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Lessons Learned from Quantitative Dynamical Modeling in Systems Biology)
- 14:31, 7 August 2018 (diff | hist) . . (+1,738) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (Paper summarized)
- 14:15, 7 August 2018 (diff | hist) . . (+1,408) . . N Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (Create Lessons Learned Page)
- 13:53, 7 August 2018 (diff | hist) . . (+212) . . N DMR Calling from BSSEQ: (Create DMR page) (current)
- 13:46, 7 August 2018 (diff | hist) . . (+218) . . N Project Imputation in Proteomics (Imputation-Page Created)
- 13:30, 7 August 2018 (diff | hist) . . (+1,178) . . N Project 20 Benchmark Problems for Modelling Intracellular Processes (Created page with "== 20 Benchmark Problem for Modelling Intracellular Processes == Ordinary differential equation (ODE) models are frequently applied to describe intracellular biochemical proc...")
(newest | oldest) View (newer 500 | older 500) (20 | 50 | 100 | 250 | 500)