Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16

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1 Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16

Tintle, N. L., Borchers, B., Brown, M., & Bekmetjev, A., Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16, 2009, BMC proceedings, 3(S7), 96.

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1.1 Summary

Briefly describe the scope of the paper, i.e. the field of research and/or application.

1.2 Study outcomes

List the paper results concerning method comparison and benchmarking:

1.2.1 Outcome O1

The performance of ...

Outcome O1 is presented as Figure X in the original publication.

1.2.2 Outcome O2

...

Outcome O2 is presented as Figure X in the original publication.

1.2.3 Outcome On

...

Outcome On is presented as Figure X in the original publication.

1.2.4 Further outcomes

If intended, you can add further outcomes here.


1.3 Study design and evidence level

1.3.1 General aspects

You can describe general design aspects here. The study designs for describing specific outcomes are listed in the following subsections:

1.3.2 Design for Outcome O1

  • The outcome was generated for ...
  • Configuration parameters were chosen ...
  • ...

1.3.3 Design for Outcome O2

  • The outcome was generated for ...
  • Configuration parameters were chosen ...
  • ...

...

1.3.4 Design for Outcome O

  • The outcome was generated for ...
  • Configuration parameters were chosen ...
  • ...

1.4 Further comments and aspects

1.5 References

The list of cited or related literature is placed here.